STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3Lysyl hydroxylase/galactosyltransferase/glucosyltransferase. (740 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
  
 
0.983
COLGALT2
Collagen beta-1,O-galactosyltransferase.
   
0.953
COLGALT1
Collagen beta-1,O-galactosyltransferase.
   
 0.953
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
  
  
 
0.901
CAMKMT
Calmodulin-lysine N-methyltransferase isoform X1.
     
  0.900
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.770
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.770
RAB3IP
Rab-3A-interacting protein isoform X1.
    
   0.709
NSD1
Nuclear receptor binding SET domain protein 1.
    
 0.697
SUV39H1
Histone-lysine N-methyltransferase SUV39H1 isoform X1.
    
  0.675
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.