Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DEDD2DNA-binding death effector domain-containing protein 2. (363 aa)    
Predicted Functional Partners:
MACO1
Macoilin 1.
      
 0.761
LCMT1
[phosphatase 2A protein]-leucine-carboxy methyltransferase.
      
 0.695
GRIN2B
Glutamate receptor ionotropic, NMDA 2B.
     
  0.663
CMSS1
Protein CMSS1 isoform X1.
      
 0.642
CCNF
F-box protein 1 (cyclin F).
    
 
 0.567
FBXO5
F-box only protein 5.
      
 0.542
SUGT1
Suppressor of G2 allele of SKP1.
      
 0.504
BCKDHB
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial.
      
 0.482
RANBP9
Ran-binding protein 9/10.
      
 0.481
ENSPVIP00000015311
annotation not available
      
 0.481
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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