STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000006932annotation not available (67 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
    
 0.841
ENSPVIP00000005654
annotation not available
  
 0.754
KDM6B
Lysine demethylase 6B.
    
 0.743
KDM6A
Lysine-specific demethylase 6A isoform X1.
    
 0.743
LOC110081409
Histone H2A type 2-B-like.
  
 0.740
LOC110088287
Histone H2A-IV-like.
  
 0.739
LOC110087651
Histone H2A type 2-C-like.
  
 0.738
LOC110069955
Histone H2A-like.
  
 0.737
LOC110075230
Histone H2A-IV-like.
  
 0.736
ENSPVIP00000013400
Histone H2A-beta, sperm-like.
  
 0.715
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.