STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRGNProteoglycan peptide core protein. (153 aa)    
Predicted Functional Partners:
EMP1
Epithelial membrane protein 1.
      
 0.662
COG1
Conserved oligomeric Golgi complex subunit 1.
    
 
 0.621
TTLL5
Tubulin polyglutamylase TTLL5 isoform X1.
      
 0.601
CRYL1
Lambda-crystallin homolog isoform X1.
      
 0.575
GLDC
Glycine dehydrogenase (decarboxylating), mitochondrial.
      
 0.565
CD44
CD44 antigen isoform X1.
   
  
 0.545
ACO2
Aconitate hydratase, mitochondrial isoform X1.
      
 0.540
C1R
Complement component 1, r subcomponent.
    
 0.521
PSMB8
Proteasome subunit beta type-8-like.
   
 
 0.491
SERPING1
Plasma protease C1 inhibitor isoform X1.
    
 0.485
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.