Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TET1Methylcytosine dioxygenase TET1. (2228 aa)    
Predicted Functional Partners:
OGT
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1.
   
 
 0.722
ARID4B
AT-rich interactive domain-containing protein 4B isoform X1.
   
 
 0.620
GPR84
G protein-coupled receptor 84.
      
 0.571
HIVEP3
Human immunodeficiency virus type I enhancer-binding protein.
      
 0.569
SELENOS
Selenoprotein S.
    
 
 0.508
LOC110077941
Homeobox protein NANOG-like.
   
 
 0.506
ARID4A
AT-rich interactive domain-containing protein 4A isoform X1.
   
 
 0.498
ENSPVIP00000027031
annotation not available
    
 
 0.497
USH1C
Harmonin isoform X1.
      
 0.472
DNMT1
DNA (cytosine-5)-methyltransferase 1 isoform X1.
      
 0.438
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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