Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000006967annotation not available (777 aa)    
Predicted Functional Partners:
COL6A2
Collagen alpha-2(VI) chain isoform X1.
   
 0.995
THBS1
Thrombospondin-1 isoform X1.
   
 0.783
DCN
Decorin.
   
 0.764
POSTN
Periostin isoform X1.
   
 
 0.742
TIMP2
Metalloproteinase inhibitor 2.
   
 
 0.738
PRRX1
Paired mesoderm homeobox protein 1 isoform X1.
   
 
 0.714
THBS2
Thrombospondin 2/3/4/5.
   
 0.674
TGFB3
Transforming growth factor beta-3 isoform X1.
   
 
 0.665
ATOH8
Protein atonal homolog 8.
      
 0.652
LAMB1
Laminin subunit beta-1.
   
 
 0.629
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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