Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPP1MAGUK 55 kDa erythrocyte membrane protein. (477 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.896
APBA2
Amyloid beta A4 precursor protein-binding family A member 2 isoform X1.
   
 0.865
APBA1
Amyloid beta A4 precursor protein-binding family A member 1 isoform X1.
   
 0.865
LIN7A
Lin-7 homolog A, crumbs cell polarity complex component.
    
 0.842
LIN7B
Protein lin-7 homolog B isoform X1.
    
 0.842
LIN7C
Protein lin-7 homolog C.
    
 0.842
APBA3
Amyloid beta precursor protein binding family A member 3.
   
 0.840
CASKIN1
CASK interacting protein 1.
    
 0.795
EPB41
Erythrocyte membrane protein band 4.1.
   
 0.782
SDC2
Syndecan-2 isoform X1.
    
 0.767
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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