STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB33ARas-related protein Rab-33A isoform X1. (585 aa)    
Predicted Functional Partners:
RIC1
RAB6A-GEF complex partner protein 1 isoform X1.
    
 0.818
TRAPPC1
Trafficking protein particle complex 1.
    
 0.784
RAB33B
Ras-related protein Rab-33B.
  
 
 
0.775
TRAPPC4
LOW QUALITY PROTEIN: trafficking protein particle complex subunit 4.
    
 0.772
TRAPPC8
Trafficking protein particle complex subunit 8 isoform X1.
    
 0.761
TBC1D25
TBC1 domain family member 25 isoform X1.
     
 0.756
TRAPPC5
Trafficking protein particle complex subunit 5.
    
 0.756
TRAPPC6B
Trafficking protein particle complex subunit 6B.
   
 0.754
TRAPPC2B
Trafficking protein particle complex subunit 2 isoform X1.
    
 0.744
USO1
General vesicular transport factor p115 isoform X1.
   
 0.702
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.