close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF16Rho guanine nucleotide exchange factor 16. (707 aa)    
Predicted Functional Partners:
ALS2
Amyotrophic lateral sclerosis 2 protein.
     
 0.601
MYO9B
Myosin IXB.
      
 0.571
ENSPVIP00000021613
annotation not available
     
 0.505
ARHGEF38
Rho guanine nucleotide exchange factor 38.
     
 0.505
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.488
DOCK9
Dedicator of cytokinesis protein 9 isoform X1.
     
 0.485
DOCK11
Dedicator of cytokinesis protein 11 isoform X1.
     
 0.485
FGD6
FYVE, RhoGEF and PH domain containing 6.
   
  
 0.481
PBK
Lymphokine-activated killer T-cell-originated protein kinase isoform X1.
    
 0.467
DOCK3
Dedicator of cytokinesis protein 3 isoform X1.
     
 0.463
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.