STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110082176Radial spoke head 10 homolog B2-like. (848 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.616
CCDC151
Coiled-coil domain-containing protein 151 isoform X1.
   
  
 0.552
CFAP44
Cilia- and flagella-associated protein 44 isoform X1.
   
    0.550
CFAP52
Cilia- and flagella-associated protein 52.
    
 0.512
CFAP74
Cilia and flagella associated protein 74.
    
 
 0.497
RSPH14
Radial spoke head 14 homolog.
    
 
 0.473
LRRC23
Leucine-rich repeat-containing protein 23.
   
 
 0.467
TSNAXIP1
Translin-associated factor X-interacting protein 1 isoform X1.
   
 
 0.452
CCDC65
Coiled-coil domain-containing protein 65 isoform X1.
    
 
 0.446
CCDC146
Coiled-coil domain-containing protein 146 isoform X1.
      
 0.433
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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