STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PMS2Mismatch repair endonuclease PMS2. (855 aa)    
Predicted Functional Partners:
MLH1
DNA mismatch repair protein MLH1.
    
0.999
MSH2
DNA mismatch repair protein MSH2.
 
 0.997
MSH3
DNA mismatch repair protein MSH3.
 
 0.988
MSH4
MutS protein homolog 4 isoform X1.
 
 0.985
EXO1
Exonuclease 1 isoform X1.
   
 0.972
ENSPVIP00000024186
annotation not available
 
 0.971
PMS1
PMS1 protein homolog 1 isoform X1.
  
0.969
POLD1
DNA polymerase delta catalytic subunit.
   
 0.968
FAN1
Fanconi-associated nuclease 1.
   
 0.965
MSH6
DNA mismatch repair protein Msh6 isoform X1.
  
 0.963
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.