STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRYMThiomorpholine-carboxylate dehydrogenase. (252 aa)    
Predicted Functional Partners:
L3HYPDH
Trans-3-hydroxy-L-proline dehydratase.
 
  
 0.957
AGMAT
Agmatinase, mitochondrial.
  
 
 0.817
ARG1
Arginase 1.
  
 
 0.817
ARG2
Arginase-2, mitochondrial isoform X1.
  
 
 0.817
LOC110074069
Cystathionine beta-synthase-like.
  
 
 0.704
LOC110074034
Cystathionine beta-synthase-like.
  
 
 0.704
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase isoform X1.
     
 0.685
AASDH
Acyl-CoA synthetase family member 4 isoform X1.
     
 0.597
ENSPVIP00000006052
annotation not available
     
 0.597
DCLK3
Doublecortin like kinase 3.
   
  
 0.593
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.