TAF7 protein (Pogona vitticeps) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TAF7

Transcription initiation factor TFIID subunit 7-like isoform X1. (361 aa)

Predicted Functional Partners:

TAF2

0.997

ENSPVIP00000012999

0.996

TAF13

0.996

TAF8

0.995

TAF12

0.994

TAF3

0.993

TAF6

0.991

TAF10

0.989

TAF4

0.987

TBP

0.984

Your Current Organism:

Pogona vitticeps

NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPVIP00000012999	TAF10	ENSPVIP00000012999	ENSPVIP00000028954	annotation not available	TATA-box binding protein associated factor 10.	0.998
ENSPVIP00000012999	TAF12	ENSPVIP00000012999	ENSPVIP00000022748	annotation not available	Transcription initiation factor TFIID subunit 12 isoform X1.	0.998
ENSPVIP00000012999	TAF13	ENSPVIP00000012999	ENSPVIP00000026384	annotation not available	Transcription initiation factor TFIID subunit 13.	0.998
ENSPVIP00000012999	TAF2	ENSPVIP00000012999	ENSPVIP00000024532	annotation not available	Transcription initiation factor TFIID subunit 2 isoform X1.	0.998
ENSPVIP00000012999	TAF3	ENSPVIP00000012999	ENSPVIP00000021643	annotation not available	Transcription initiation factor TFIID subunit 3.	0.997
ENSPVIP00000012999	TAF4	ENSPVIP00000012999	ENSPVIP00000009186	annotation not available	Transcription initiation factor TFIID subunit 4.	0.998
ENSPVIP00000012999	TAF6	ENSPVIP00000012999	ENSPVIP00000001005	annotation not available	TATA-box binding protein associated factor 6.	0.998
ENSPVIP00000012999	TAF7	ENSPVIP00000012999	ENSPVIP00000007135	annotation not available	Transcription initiation factor TFIID subunit 7-like isoform X1.	0.996
ENSPVIP00000012999	TAF8	ENSPVIP00000012999	ENSPVIP00000013477	annotation not available	Transcription initiation factor TFIID subunit 8 isoform X1.	0.998
ENSPVIP00000012999	TBP	ENSPVIP00000012999	ENSPVIP00000002247	annotation not available	Transcription initiation factor TFIID TATA-box-binding protein.	0.995
TAF10	ENSPVIP00000012999	ENSPVIP00000028954	ENSPVIP00000012999	TATA-box binding protein associated factor 10.	annotation not available	0.998
TAF10	TAF12	ENSPVIP00000028954	ENSPVIP00000022748	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 12 isoform X1.	0.999
TAF10	TAF13	ENSPVIP00000028954	ENSPVIP00000026384	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 13.	0.995
TAF10	TAF2	ENSPVIP00000028954	ENSPVIP00000024532	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 2 isoform X1.	0.998
TAF10	TAF3	ENSPVIP00000028954	ENSPVIP00000021643	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 3.	0.997
TAF10	TAF4	ENSPVIP00000028954	ENSPVIP00000009186	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 4.	0.996
TAF10	TAF6	ENSPVIP00000028954	ENSPVIP00000001005	TATA-box binding protein associated factor 10.	TATA-box binding protein associated factor 6.	0.999
TAF10	TAF7	ENSPVIP00000028954	ENSPVIP00000007135	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 7-like isoform X1.	0.989
TAF10	TAF8	ENSPVIP00000028954	ENSPVIP00000013477	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID subunit 8 isoform X1.	0.998
TAF10	TBP	ENSPVIP00000028954	ENSPVIP00000002247	TATA-box binding protein associated factor 10.	Transcription initiation factor TFIID TATA-box-binding protein.	0.990