STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN5Leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1. (851 aa)    
Predicted Functional Partners:
TRAPPC6B
Trafficking protein particle complex subunit 6B.
   
  
 0.695
PNN
Pinin.
      
 0.666
ZGLP1
GATA-type zinc finger protein 1 isoform X1.
    
 
 0.575
FBXO33
F-box only protein 33.
      
 0.574
NUDC
Nuclear migration protein nudC.
      
 0.568
CCDC32
Uncharacterized protein C15orf57 homolog.
      
 0.567
LRRC61
Leucine rich repeat containing 61.
    
 
 0.506
LOC110084101
Anthrax toxin receptor 2-like.
    
 0.487
MDGA1
MAM domain-containing glycosylphosphatidylinositol anchor protein 1 isoform X1.
   
 0.476
MDGA2
MAM domain-containing glycosylphosphatidylinositol anchor protein 2.
   
 0.476
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.