STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110091188Carbohydrate sulfotransferase 5-like. (385 aa)    
Predicted Functional Partners:
LOC110076286
Carbohydrate sulfotransferase 6-like.
  
  
 
0.907
CHST13
Carbohydrate sulfotransferase 11-like.
      
 0.566
CHST12
Carbohydrate sulfotransferase 12 isoform X1.
      
 0.563
NCAN
Neurocan core protein isoform X1.
     
  0.455
CHST11
Carbohydrate sulfotransferase 11 isoform X1.
      
 0.439
CHST14
Carbohydrate sulfotransferase 14.
      
 0.432
LACTBL1
Lactamase beta like 1.
      
 0.431
CHST15
LOW QUALITY PROTEIN: carbohydrate sulfotransferase 15.
      
 0.421
CHST10
Carbohydrate 3-sulfotransferase 10.
      
 0.411
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.