STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF4Transcription factor 4 isoform X1. (537 aa)    
Predicted Functional Partners:
TAL1
T-cell acute lymphocytic leukemia protein 1 isoform X1.
    
 0.817
MYOD1
Myoblast determination protein 1.
    
 0.814
ASCL1
Achaete-scute complex protein.
   
 0.780
MYF5
Myogenic factor 5.
    
 0.744
ATOH1
Atonal bHLH transcription factor 1.
    
 
 0.710
CTNNB1
Catenin beta-1 isoform X1.
    
 0.699
MYOG
Myogenic factor 4 (myogenin).
    
 0.698
ASCL4
Achaete-scute complex protein.
    
 0.697
MYF6
Myogenic factor 6.
    
 0.689
ID3
DNA-binding protein inhibitor ID-3 isoform X1.
    
 
 0.680
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.