STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MEGF6Multiple EGF like domains 6. (1542 aa)    
Predicted Functional Partners:
WRAP73
WD repeat-containing protein WRAP73 isoform X1.
    
 
 0.682
HMGXB4
HMG domain-containing protein 4 isoform X1.
      
 0.671
RITA1
RBPJ-interacting and tubulin-associated protein 1.
      
 0.623
LOC110074297
Ligand of Numb protein X 2-like.
    
 0.584
CTNNAL1
Alpha-catulin isoform X1.
     
 0.576
SERINC2
Serine incorporator 2.
     
 0.511
UBOX5
U-box domain-containing protein 5.
      
 0.506
LOC110080384
E3 ubiquitin-protein ligase listerin-like isoform X1.
      
 0.505
LOC110076991
E3 ubiquitin-protein ligase listerin-like.
      
 0.505
ARHGEF25
Rho guanine nucleotide exchange factor 25 isoform X1.
    
 0.488
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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