STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SF3A2Splicing factor 3A subunit 2. (205 aa)    
Predicted Functional Partners:
SF3A3
Splicing factor 3a subunit 3.
   
 0.999
SF3A1
Splicing factor 3A subunit 1 isoform X1.
   
 0.999
SF3B4
Splicing factor 3B subunit 4.
   
 0.995
SF3B1
Splicing factor 3B subunit 1 isoform X1.
   
 0.992
U2SURP
U2 snRNP-associated SURP motif-containing protein isoform X1.
    
 0.991
RBM17
Splicing factor 45 isoform X1.
    
 0.990
SF3B3
Splicing factor 3B subunit 3.
    
 0.989
SF3B2
Splicing factor 3b subunit 2.
   
 0.988
SF3B5
Splicing factor 3B subunit 5 isoform X1.
   
 0.988
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.987
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.