STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110086804Claudin-16-like. (223 aa)    
Predicted Functional Partners:
CLDN19
Claudin-19.
   
 0.856
CLDN5
Claudin-5.
    
 0.795
TJP1
Tight junction protein ZO-1 isoform X1.
     
 0.777
CLDN8
Claudin-8-like.
   
 0.771
LOC110080364
Claudin-8-like.
    
 0.771
CLDN18
Claudin-18.
    
 0.758
CLDN7
Claudin-7.
   
0.741
CLDN1
Claudin-1-like.
   
0.741
LOC110088384
Claudin-4-like.
    
 0.738
CLDN14
Claudin-14.
   
 
 0.727
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.