STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN3Reticulon-3 isoform X1. (914 aa)    
Predicted Functional Partners:
PARP3
Poly [ADP-ribose] polymerase 2/3/4.
      
 0.679
SOCS6
Suppressor of cytokine signaling 6/7.
      
 0.679
SEC63
Translocation protein SEC63 homolog.
    
 
 0.667
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.536
ENSPVIP00000020740
annotation not available
    
 
 0.523
LOC110072479
Receptor expression-enhancing protein 6-like.
    
 
 0.510
OMG
Oligodendrocyte myelin glycoprotein.
    
 0.502
LINGO1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein.
   
 0.482
GCH1
GTP cyclohydrolase 1-like.
    
   0.468
LOC110080758
GTP cyclohydrolase 1-like.
    
   0.468
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.