STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110084991Serum amyloid P-component-like isoform X1. (223 aa)    
Predicted Functional Partners:
ENSPVIP00000031051
annotation not available
   
  
 0.624
TTR
Transthyretin.
   
 
 0.614
APOH
Apolipoprotein H.
   
 
 0.537
CPB2
Carboxypeptidase B2 isoform X1.
   
    0.501
FGB
Fibrinogen beta chain.
   
 
 0.462
LOC110071427
C-reactive protein-like.
  
 
0.458
ENSPVIP00000000360
annotation not available
  
 
0.457
LOC110070612
C-reactive protein-like.
  
 
0.457
LOC110070614
C-reactive protein-like.
  
 
0.457
CERT1
Collagen type IV alpha-3-binding protein isoform X1.
    
 
 0.451
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.