Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110084991Serum amyloid P-component-like isoform X1. (223 aa)    
Predicted Functional Partners:
ENSPVIP00000031051
annotation not available
   
  
 0.753
FGB
Fibrinogen beta chain.
   
 
 0.703
FGG
Fibrinogen gamma chain.
   
 
 0.696
TTR
Transthyretin.
   
 
 0.676
C11orf53
Uncharacterized protein C11orf53 homolog.
      
 0.619
IL6
Interleukin 6.
      
 0.592
SERPINC1
Antithrombin III.
   
  
 0.577
LITAF
Lipopolysaccharide-induced tumor necrosis factor-alpha factor isoform X1.
      
 0.574
APOH
Apolipoprotein H.
   
 
 0.569
C9
Complement C9.
   
  
 0.554
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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