Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NTHL1Endonuclease III-like protein 1. (243 aa)    
Predicted Functional Partners:
APEX1
DNA-(apurinic or apyrimidinic site) lyase.
 
 0.994
NEIL1
Endonuclease VIII-like 1.
      
 0.894
APEX2
Apurinic/apyrimidinic endodeoxyribonuclease 2.
  
 0.877
OGG1
8-oxoguanine DNA glycosylase.
   
 
 0.844
ERCC4
DNA excision repair protein ERCC-4.
    
 
 0.808
MLH1
DNA mismatch repair protein MLH1.
  
 
 0.781
ENSPVIP00000017105
annotation not available
  
 0.701
ENSPVIP00000021249
annotation not available
  
 0.701
ENSPVIP00000024537
annotation not available
  
 0.701
ENSPVIP00000029255
annotation not available
  
 0.701
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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