STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110070366Voltage-dependent T-type calcium channel subunit alpha-1H-like. (1557 aa)    
Predicted Functional Partners:
CATSPER2
Cation channel sperm-associated protein 2.
   
 0.647
LOC110086590
Cation channel sperm-associated protein subunit beta-like.
    
 0.624
USP5
Ubiquitin carboxyl-terminal hydrolase 5 isoform X1.
    
 
 0.601
CATSPERG
Cation channel sperm-associated protein subunit gamma.
    
 0.597
CATSPER3
Cation channel sperm-associated protein 3 isoform X1.
   
 0.596
ENSPVIP00000018263
Cation channel sperm-associated protein subunit delta-like.
    
 0.565
LOC110078663
Caveolin-2-like.
    
 
 0.536
ADCY1
Adenylate cyclase type 1.
   
  
 0.482
EFCAB9
EF-hand calcium-binding domain-containing protein 9.
    
 
 0.445
SULF2
Extracellular sulfatase Sulf-2.
      
 0.437
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.