STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD1Polycystin 1, transient receptor potential channel interacting. (4307 aa)    
Predicted Functional Partners:
PKD2
Polycystin 2.
   
 0.973
ENSPVIP00000023109
annotation not available
   
 0.973
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
   
 0.904
PRKD1
Serine/threonine-protein kinase D1 isoform X1.
    
 
 0.710
PRKD2
Serine/threonine-protein kinase D2.
    
 
 0.710
ENSPVIP00000024804
annotation not available
    
 
 0.710
PRKD3
Serine/threonine-protein kinase D3.
    
 
 0.710
IFT88
Intraflagellar transport protein 88 homolog isoform X1.
      
 0.623
EXOC2
Exocyst complex component 2.
     
  0.617
PKD2L2
Polycystic kidney disease 2-like 2 protein isoform X1.
   
 0.585
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.