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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAF7E3 ubiquitin-protein ligase TRAF7 isoform X1. (670 aa)    
Predicted Functional Partners:
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.962
LOC110072526
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.962
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
    
 0.958
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
    
 0.956
NOL10
Ribosome biogenesis protein ENP2.
     
 0.904
ENSPVIP00000030718
annotation not available
    
0.899
TEP1
Telomerase protein component 1 isoform X1.
    
 0.899
NOC4L
U3 small nucleolar RNA-associated protein 19.
   
 
  0.895
FCF1
U3 small nucleolar RNA-associated protein 24.
   
 
  0.895
NOP58
Nucleolar protein 58 isoform X1.
    
  0.893
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.