Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
TRAF7E3 ubiquitin-protein ligase TRAF7 isoform X1. (670 aa)    
Predicted Functional Partners:
LOC110085837
Mitogen-activated protein kinase kinase kinase 3-like isoform X1.
    
 0.875
MAP3K3
Mitogen-activated protein kinase kinase kinase 3 isoform X1.
    
 0.875
BIRC6
Baculoviral IAP repeat-containing protein 6 isoform X1.
    
 0.814
MIB2
E3 ubiquitin-protein ligase mind-bomb.
    
 0.808
LRIT3
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3.
    
 0.796
TONSL
Tonsoku like, DNA repair protein.
    
 0.778
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
   
 0.775
ZFAND4
AN1-type zinc finger and ubiquitin domain-containing protein 1.
   
 0.749
MAP3K2
Mitogen-activated protein kinase kinase kinase 2.
    
 0.731
SKP1
S-phase kinase-associated protein 1.
    
 0.722
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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