STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110090719Catenin alpha-2. (640 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta-1 isoform X1.
   
 0.982
VCL
Vinculin isoform X1.
   
0.976
AFDN
Afadin isoform X1.
   
 0.965
TJP1
Tight junction protein ZO-1 isoform X1.
   
 0.939
ACTN1
Alpha-actinin-1 isoform X1.
   
 0.926
ACTN4
Alpha-actinin-4 isoform X1.
   
 0.926
ACTB
Actin, cytoplasmic 1.
    
 0.921
ACTG1
Actin, cytoplasmic 2.
    
 0.921
LOC110084468
Actin, cytoplasmic 3-like isoform X1.
    
 0.921
LOC110084467
Actin, cytoplasmic type 5-like.
    
 0.921
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.