STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEPD1Endonuclease/exonuclease/phosphatase family domain-containing protein 1. (558 aa)    
Predicted Functional Partners:
LEO1
RNA polymerase-associated protein LEO1.
   
 0.994
IWS1
Protein IWS1 homolog isoform X1.
   
 0.936
SUPT5H
Transcription elongation factor SPT5.
   
 0.929
SUPT16H
FACT complex subunit SPT16.
   
 0.928
SSRP1
Structure-specific recognition protein 1.
   
 0.922
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.918
CDC73
Parafibromin.
   
 0.909
RTF1
RNA polymerase-associated protein RTF1 homolog isoform X1.
   
 0.909
PAF1
RNA polymerase II-associated factor 1 homolog.
    
  0.858
POLR2G
DNA-directed RNA polymerase II subunit RPB7.
    
 0.808
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.