Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL5BADP-ribosylation factor-like protein 5B isoform X1. (179 aa)    
Predicted Functional Partners:
COPB1
Coatomer subunit beta isoform X1.
   
 0.723
COPB2
Coatomer subunit beta.
   
 0.715
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
   
 0.707
ARCN1
Coatomer subunit delta.
   
 0.702
COPA
Coatomer protein complex subunit alpha.
   
 0.687
PI4KB
Phosphatidylinositol 4-kinase beta isoform X1.
    
 0.684
ENSPVIP00000022024
annotation not available
    
 0.682
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1.
    
 0.682
COPE
Coatomer subunit epsilon.
   
 0.681
BBS1
Bardet-Biedl syndrome 1 protein.
   
 0.663
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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