Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEAP2Liver-expressed antimicrobial peptide 2. (76 aa)    
Predicted Functional Partners:
GHSR
Growth hormone secretagogue receptor type 1.
    
 
 0.613
PACS1
Phosphofurin acidic cluster sorting protein 1 isoform X1.
    
   0.546
ERH
Enhancer of rudimentary homolog.
      
 0.530
ENSPVIP00000004622
annotation not available
      
 0.479
LOC110080763
Phosphofurin acidic cluster sorting protein 1-like.
    
   0.433
PACS2
Phosphofurin acidic cluster sorting protein 2-like.
    
   0.433
GUCD1
Protein GUCD1 isoform X1.
      
 0.423
LOC110082605
Cathelicidin antimicrobial peptide.
      
 0.423
C16orf72
UPF0472 protein C16orf72 homolog.
      
 0.410
ENSPVIP00000009161
annotation not available
    
 
 0.402
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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