Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM29Tripartite motif containing 29. (545 aa)    
Predicted Functional Partners:
RUVBL2
RuvB-like protein 2.
    
 
 0.612
RIPK4
Receptor-interacting serine/threonine-protein kinase 4.
  
 0.609
TRIM32
Tripartite motif-containing protein 32.
    
 0.600
TRIM9
Tripartite motif containing 9.
     
 0.573
MUL1
Mitochondrial ubiquitin ligase activator of NFKB 1 isoform X1.
      
 0.570
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.566
RNF207
RING finger protein 207 isoform X1.
      
 0.564
TRIM23
Tripartite motif-containing protein 23.
    
 0.548
TRIM14
Tripartite motif-containing protein 14.
   
 0.531
HINT1
Histidine triad nucleotide-binding protein 1.
    
 
 0.503
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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