STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM29Tripartite motif containing 29. (545 aa)    
Predicted Functional Partners:
ENSPVIP00000012874
annotation not available
  
     0.440
UBC
Polyubiquitin-C.
   
 0.436
BBOX1
Gamma-butyrobetaine dioxygenase.
      
 0.435
ENSPVIP00000001052
annotation not available
  
     0.429
RPS27A
Ribosomal protein S27a.
    
  0.424
CCSER2
Serine-rich coiled-coil domain-containing protein 2 isoform X1.
  
     0.423
IL22RA1
Interleukin-22 receptor subunit alpha-1.
  
     0.406
ENSPVIP00000028034
KRAB domain-containing zinc finger protein.
  
 
  0.406
ENSPVIP00000028528
annotation not available
  
 
  0.403
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.