Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
USP2Ubiquitin carboxyl-terminal hydrolase 2 isoform X1. (605 aa)    
Predicted Functional Partners:
RIPK1
Receptor-interacting serine/threonine-protein kinase 1 isoform X1.
    
 0.852
UBC
Polyubiquitin-C.
   
 0.789
LOC110077941
Homeobox protein NANOG-like.
    
 
 0.760
OTUB1
Ubiquitin thioesterase OTUB1 isoform X1.
   
 0.760
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1.
   
 0.744
RPS27A
Ribosomal protein S27a.
    
 0.738
GATA3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.709
RNF41
E3 ubiquitin-protein ligase NRDP1.
    
 0.683
STAM
Signal transducing adapter molecule 1 isoform X1.
    
 0.664
STAM2
Signal transducing adapter molecule 2 isoform X1.
    
 0.664
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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