Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NLRX1NLR family member X1 isoform X1. (1025 aa)    
Predicted Functional Partners:
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
   
 
 0.901
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
   
 
  0.901
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 
 0.901
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
   
 
 0.901
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
   
 
  0.900
LOC110071745
Microtubule-associated proteins 1A/1B light chain 3C-like isoform X1.
   
 
  0.900
TUFM
Elongation factor Tu, mitochondrial.
    
 
 0.823
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta isoform X1.
    
 0.745
CCDC65
Coiled-coil domain-containing protein 65 isoform X1.
    
 
 0.672
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
 0.657
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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