Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HINFPHistone H4 transcription factor isoform X1. (530 aa)    
Predicted Functional Partners:
NPAT
Protein NPAT.
    
 
 0.909
GSC
Homeobox protein goosecoid.
    
   0.874
ZNF318
Zinc finger protein 318-like.
      
 0.695
E2F7
Transcription factor E2F7 isoform X1.
      
 0.663
SDK1
Protein sidekick-1 isoform X1.
      
 0.640
SDK2
Protein sidekick-2 isoform X1.
      
 0.640
DCTN2
Dynactin subunit 2 isoform X1.
      
 0.638
LSM10
U7 snRNA-associated Sm-like protein LSm10.
      
 0.570
FEV
ETS oncogene family protein FEV.
      
 0.508
PSMB7
Proteasome subunit beta type-7.
      
 0.483
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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