Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCO2Beta,beta-carotene 9',10'-oxygenase isoform X1. (576 aa)    
Predicted Functional Partners:
ASIP
Agouti signaling protein.
      
 0.755
TYRP1
Tyrosinase related protein 1.
     
 0.715
STARD3
StAR-related lipid transfer protein 3.
      
 0.709
TBC1D22A
TBC1 domain family member 22A isoform X1.
      
 0.696
SPR
Sepiapterin reductase.
      
 0.670
RARS1
Arginine--tRNA ligase, cytoplasmic.
      
 0.663
PIBF1
LOW QUALITY PROTEIN: progesterone-induced-blocking factor 1.
      
 0.635
FAM92B
Protein FAM92B isoform X1.
      
 0.623
TFE3
Transcription factor E3.
      
 0.595
MITF
Microphthalmia-associated transcription factor isoform X1.
      
 0.595
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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