STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRR1Leucine-rich repeat protein 1. (340 aa)    
Predicted Functional Partners:
CUL2
Cullin-2 isoform X1.
    
 0.950
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.901
COPS2
COP9 signalosome complex subunit 2 isoform X1.
    
  0.900
COPS5
COP9 signalosome complex subunit 5.
    
  0.889
COPS8
COP9 signalosome subunit 8.
    
 0.888
COPS6
COP9 signalosome complex subunit 6.
    
  0.878
ELOB
Elongin-B isoform X1.
    
 0.842
ELOC
Elongin-C.
    
 0.798
ENSPVIP00000028794
annotation not available
    
 0.798
KERA
Keratocan.
  
   
 0.771
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.