STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM1Pleckstrin homology domain-containing family M member 1 isoform X1. (1134 aa)    
Predicted Functional Partners:
RAB7A
Ras-related protein Rab-7A.
    
 0.991
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
    
 0.966
LOC110071745
Microtubule-associated proteins 1A/1B light chain 3C-like isoform X1.
    
 0.966
GABARAP
Gamma-aminobutyric acid receptor-associated protein.
    
 0.950
RAB7B
Ras-related protein Rab-7B.
    
 0.945
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.943
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
   
 
 0.943
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
    
 
 0.919
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
    
 0.914
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.914
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.