STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHM1Pleckstrin homology domain-containing family M member 1 isoform X1. (1134 aa)    
Predicted Functional Partners:
SNX10
Sorting nexin-10/11.
   
  
 0.679
VPS39
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
   
 
 0.650
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
    
 
 0.642
LOC110071745
Microtubule-associated proteins 1A/1B light chain 3C-like isoform X1.
    
 
 0.642
VPS11
Vacuolar protein sorting-associated protein 11 homolog isoform X1.
    
 
 0.638
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 
 0.615
SNAP29
Synaptosomal-associated protein 29.
      
 0.612
OSTM1
Osteopetrosis-associated transmembrane protein 1 (chloride channel 7 beta subunit).
      
 0.587
STX17
Syntaxin 17.
      
 0.587
UVRAG
UV radiation resistance-associated gene protein isoform X1.
    
 
 0.585
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.