STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCMT1[phosphatase 2A protein]-leucine-carboxy methyltransferase. (348 aa)    
Predicted Functional Partners:
PPP4C
Serine/threonine-protein phosphatase 4 catalytic subunit.
   
 0.932
LCMT2
TRNA wybutosine-synthesizing protein 4.
 
    
 0.901
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 0.875
PPP2CB
Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform.
    
 0.875
PTPA
Serine/threonine-protein phosphatase 2A activator isoform X1.
    
 
 0.828
IGBP1
Immunoglobulin-binding protein 1.
    
 
 0.814
PPP2R1A
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
 0.795
PPME1
Protein phosphatase methylesterase 1.
      
 0.784
SLC25A32
Solute carrier family 25 (mitochondrial folate transporter), member 32.
    
   0.771
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
    
 0.767
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: medium (70%) [HD]