Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GRK7Rhodopsin kinase. (581 aa)    
Predicted Functional Partners:
LOC110080195
Green-sensitive opsin.
   
 0.985
RHO
Rhodopsin.
   
 0.985
RCVRN
Recoverin.
   
 0.975
GRK1
Rhodopsin kinase.
  
 
0.930
ARRB2
Arrestin beta 2.
   
 0.892
ARRB1
Arrestin beta 1.
   
 0.892
GNG11
Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11.
    
 0.758
SAG
S-arrestin.
   
 0.758
CXCR4
C-X-C chemokine receptor type 4.
    
 0.700
LOC110085151
C-X-C chemokine receptor type 2-like.
    
 0.694
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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