Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF7RING-box protein 2 isoform X1. (114 aa)    
Predicted Functional Partners:
CUL5
Cullin-5 isoform X1.
    
 0.995
ELOB
Elongin-B isoform X1.
   
 0.994
UBE2F
NEDD8-conjugating enzyme UBE2F isoform X1.
   
 0.984
CUL1
Cullin-1 isoform X1.
    
 0.981
ELOC
Elongin-C.
   
 0.973
ENSPVIP00000028794
annotation not available
   
 0.973
NEDD8
Ubiquitin-like protein Nedd8.
   
 0.957
UBXN7
UBX domain-containing protein 7 isoform X1.
    
 0.952
CUL2
Cullin-2 isoform X1.
    
 0.935
UBE2C
Ubiquitin-conjugating enzyme E2 C.
    
 0.928
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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