Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBX18T-box transcription factor TBX18. (244 aa)    
Predicted Functional Partners:
WARS2
Tryptophan--tRNA ligase, mitochondrial.
      
 0.570
WT1
Wilms tumor protein isoform X1.
      
 0.567
NKX2-5
Homeobox protein Nkx-2.5.
    
 0.545
WARS1
Tryptophan--tRNA ligase, cytoplasmic.
      
 0.511
ACTR10
Actin-related protein 10.
      
 0.508
SHOX
Short stature homeobox protein isoform X1.
   
 0.487
SHOX2
Short stature homeobox protein 2.
   
 0.487
EPAS1
Endothelial PAS domain-containing protein 1 isoform X1.
   
  
 0.439
PALMD
A-kinase anchor protein 2.
      
 0.419
SEMA3D
Semaphorin-3D.
      
 0.414
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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