STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARP1FERM, RhoGEF and pleckstrin domain-containing protein 1 isoform X1. (1044 aa)    
Predicted Functional Partners:
RHOF
Rho-related GTP-binding protein RhoF isoform X1.
     
 0.623
ITSN2
Intersectin-2 isoform X1.
     
 0.616
SDC1
Syndecan 1.
    
 
 0.601
BAIAP2L1
BAR/IMD domain containing adaptor protein 2 like 1.
     
 0.598
NRP1
Neuropilin-1 isoform X1.
     
 0.575
AFDN
Afadin isoform X1.
      
 0.573
NDUFA1
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1.
      
 0.571
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
     
 0.566
PIP5K1A
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1.
     
 0.566
PTN
Pleiotrophin.
      
 0.528
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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