Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CYB5R4Cytochrome b5 reductase 4 isoform X1. (524 aa)    
Predicted Functional Partners:
LOC110072915
Cytidine monophosphate-N-acetylneuraminic acid hydroxylase-like.
     
 0.909
DHODH
Dihydroorotate dehydrogenase (quinone).
  
 0.893
UMPS
Uridine 5'-monophosphate synthase.
  
 
 0.859
DPYD
Dihydropyrimidine dehydrogenase [NADP(+)] isoform X1.
  
 0.837
CYB5B
Cytochrome b5 type B.
   
 0.772
CYB5D1
Cytochrome b5 domain-containing protein 1 isoform X1.
   
 0.772
CYB5A
Cytochrome b5.
   
 0.772
LOC110074343
Ferredoxin-2, mitochondrial.
  
 
 0.756
VPS54
Vacuolar protein sorting-associated protein 54 isoform X1.
    
 
 0.743
SUOX
Sulfite oxidase, mitochondrial isoform X1.
   
 
 0.712
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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