Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000007769annotation not available (271 aa)    
Predicted Functional Partners:
SNRPD3
Small nuclear ribonucleoprotein Sm D3.
   
 0.911
SNRPE
Small nuclear ribonucleoprotein E.
   
 0.907
TMEM95
Transmembrane protein 95.
      
 0.906
SNRPF
Small nuclear ribonucleoprotein F.
   
 0.906
SNRPD2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
   
 0.897
SNRPG
Small nuclear ribonucleoprotein G.
   
 0.895
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
   
 0.844
SF3B4
Splicing factor 3B subunit 4.
    
 0.839
SF3B2
Splicing factor 3b subunit 2.
   
 0.836
DDX46
Probable ATP-dependent RNA helicase DDX46.
    
 0.829
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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