STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEPHHephaestin. (1156 aa)    
Predicted Functional Partners:
FECH
Protoporphyrin/coproporphyrin ferrochelatase.
   
 
 0.936
FXN
Frataxin, mitochondrial-like.
     
 0.925
HMOX1
Heme oxygenase 1.
    
 0.914
HMOX2
Heme oxygenase 2.
    
 0.914
CP
Ceruloplasmin.
  
  
 
0.902
SLC40A1
Solute carrier family 40 (iron-regulated transporter), member 1.
    
 0.747
ATP7B
Copper-transporting ATPase 2.
  
 
 0.530
ATP7A
Copper-transporting ATPase 1 isoform X1.
  
 
 0.530
PROS1
Vitamin K-dependent protein S.
   
 0.502
PEX12
Peroxisome assembly protein 12.
    
 
 0.483
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.