Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPVIP00000007822annotation not available (340 aa)    
Predicted Functional Partners:
FAU
Ubiquitin-like protein fubi and ribosomal protein S30.
   
  0.747
RPL34
Large subunit ribosomal protein L34e.
  
 0.541
RPL29
Ribosomal protein L29.
   
 0.539
RPL30
Large subunit ribosomal protein L30e.
   
 0.537
RPL15
Large subunit ribosomal protein L15e.
   
  0.525
ENSPVIP00000028682
annotation not available
   
 0.515
RPS28
Small subunit ribosomal protein S28e.
   
 
 0.503
RPL19
Large subunit ribosomal protein L19e.
   
 0.502
RPL5
Large subunit ribosomal protein L5e.
   
  0.493
LOC110072527
Ubiquitin-large subunit ribosomal protein L40e.
   
  0.493
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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