STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
P3H1Procollagen-proline 3-dioxygenase 1. (758 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
    
 0.788
CRTAP
Cartilage-associated protein.
   
 0.779
P3H4
Synaptonemal complex protein SC65 isoform X1.
   
 0.779
PPIC
Peptidyl-prolyl isomerase C (cyclophilin C).
    
 0.623
WDR19
WD repeat-containing protein 19 isoform X1.
      
 0.576
SLC26A2
Solute carrier family 26 (sulfate anion transporter), member 2.
      
 0.569
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.561
SLC26A5
Solute carrier family 26, member 5.
      
 0.526
ENSPVIP00000032589
annotation not available
      
 0.494
USH2A
LOW QUALITY PROTEIN: usherin.
      
 0.471
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.