STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P3H1Procollagen-proline 3-dioxygenase 1. (758 aa)    
Predicted Functional Partners:
PPIB
Peptidyl-prolyl cis-trans isomerase B (cyclophilin B).
   
 0.710
CRTAP
Cartilage-associated protein.
   
0.649
P3H4
Synaptonemal complex protein SC65 isoform X1.
   
0.649
PPIC
Peptidyl-prolyl isomerase C (cyclophilin C).
   
 0.574
COL6A2
Collagen alpha-2(VI) chain isoform X1.
   
 
 0.461
ENSPVIP00000003246
annotation not available
   
 0.455
SERPINH1
Serpin peptidase inhibitor, clade H, member 1.
   
 
 0.444
PDIA2
Protein disulfide-isomerase A2.
   
 0.442
P4HB
Protein disulfide-isomerase A1.
   
 0.442
ENSPVIP00000014623
annotation not available
     
 0.441
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.