STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPHN1LOW QUALITY PROTEIN: oligophrenin-1. (771 aa)    
Predicted Functional Partners:
CDC42
Cell division control protein 42 homolog isoform X1.
    
 0.609
ARHGAP10
Rho GTPase-activating protein 10 isoform X1.
    
   0.599
CDC42EP2
CDC42 effector protein 2.
    
   0.557
C2CD2
C2 domain-containing protein 2.
    
   0.550
MAIP1
M-AAA protease-interacting protein 1, mitochondrial.
      
 0.495
NEPRO
Nucleolus and neural progenitor protein isoform X1.
      
 0.485
AGTR2
Angiotensin II receptor type 2.
      
 0.481
LOC110081153
Ras homolog gene family, member A.
    
 0.475
RHOC
Rho-related GTP-binding protein RhoC.
    
 0.475
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.475
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.