STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL1Sal-like protein 1. (1170 aa)    
Predicted Functional Partners:
HOXD12
Homeobox D12.
    
 
 0.824
ENSPVIP00000033533
annotation not available
 
  
  0.796
LOC110070984
POU domain, class 5, transcription factor 1-like isoform X1.
   
 0.790
LOC110077941
Homeobox protein NANOG-like.
   
 0.779
GATAD2B
Transcriptional repressor p66-beta.
    
 0.737
HOXD11
Homeobox D11.
    
 
 0.707
GATAD2A
Transcriptional repressor p66-alpha isoform X1.
    
 0.685
RBBP4
Histone-binding protein RBBP4 isoform X1.
    
 0.659
MYF6
Myogenic factor 6.
    
 
 0.620
SALL4
Sal-like protein 4 isoform X1.
    
  0.598
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.