Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH2G patch domain-containing protein 2 isoform X1. (509 aa)    
Predicted Functional Partners:
RRP15
RRP15-like protein.
      
 0.900
DHX15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43.
    
 0.825
PINX1
PIN2/TERF1-interacting telomerase inhibitor 1.
    
 
 0.739
DDX10
Probable ATP-dependent RNA helicase DDX10.
   
 0.730
DDX18
ATP-dependent RNA helicase DDX18/HAS1.
    
  0.699
TFIP11
Tuftelin-interacting protein 11.
   
 0.692
BYSL
Essential nuclear protein 1.
    
 
 0.684
NOL6
U3 small nucleolar RNA-associated protein 22.
   
 
 0.683
UTP25
U3 small nucleolar RNA-associated protein 25.
    
 
 0.671
CCNL1
Cyclin-L1.
   
   0.668
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.