Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NRDE2Protein NRDE2 homolog. (1235 aa)    
Predicted Functional Partners:
MTREX
Superkiller viralicidic activity 2-like 2.
    
 
 0.891
GPATCH1
G patch domain-containing protein 1.
   
 
 0.886
CCDC174
Coiled-coil domain-containing protein 174 isoform X1.
    
 
 0.866
TFIP11
Tuftelin-interacting protein 11.
   
 
 0.861
CDC14B
Dual specificity protein phosphatase CDC14B isoform X1.
    
 
 0.742
CDC14A
Dual specificity protein phosphatase CDC14A.
    
 
 0.742
FAM163B
Protein FAM163B.
      
 0.717
LMF1
Lipase maturation factor 1.
      
 0.716
PPP2R2B
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1.
    
 
 0.704
PPP2R2A
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1.
    
 
 0.704
Your Current Organism:
Pogona vitticeps
NCBI taxonomy Id: 103695
Other names: P. vitticeps, ZMB 30101, central bearded dragon
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